Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm21825-201ENSMUST00000185728 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm29109-201ENSMUST00000185895 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21896-201ENSMUST00000186520 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21873-201ENSMUST00000186728 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21794-201ENSMUST00000187056 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21880-201ENSMUST00000187275 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21826-201ENSMUST00000187451 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21198-201ENSMUST00000188393 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21749-201ENSMUST00000189343 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21901-201ENSMUST00000189568 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm29424-201ENSMUST00000189716 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm28599-201ENSMUST00000189838 694 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21867-201ENSMUST00000189917 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm29269-201ENSMUST00000190087 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21722-201ENSMUST00000190153 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm28423-201ENSMUST00000190701 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21899-201ENSMUST00000190745 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21910-201ENSMUST00000191163 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21849-201ENSMUST00000191571 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm28678-201ENSMUST00000191593 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm20910-201ENSMUST00000193268 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm21871-201ENSMUST00000194621 696 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Gm15653-201ENSMUST00000119247 907 ntBASIC16.35■□□□□ 0.21
Nup88Q8CEC0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Gm44855-201ENSMUST00000205725 362 ntBASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup88Q8CEC0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Gm16476-201ENSMUST00000221544 139 ntBASIC16.34■□□□□ 0.21
Nup88Q8CEC0 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Syt7-205ENSMUST00000224135 1557 ntBASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nup88Q8CEC0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nup88Q8CEC0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms