Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Gm2495-201ENSMUST00000191160 466 ntBASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Gm5161-201ENSMUST00000075243 853 ntBASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
Shisa4Q8CA71 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Shisa4Q8CA71 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Shisa4Q8CA71 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shisa4Q8CA71 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shisa4Q8CA71 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Shisa4Q8CA71 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shisa4Q8CA71 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Gm17150-201ENSMUST00000165577 381 ntBASIC16.01■□□□□ 0.15
Shisa4Q8CA71 AY702102-202ENSMUST00000194651 1173 ntBASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shisa4Q8CA71 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16■□□□□ 0.15
Shisa4Q8CA71 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Shisa4Q8CA71 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16■□□□□ 0.15
Shisa4Q8CA71 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Gm7899-201ENSMUST00000192935 1897 ntBASIC16■□□□□ 0.15
Shisa4Q8CA71 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Shisa4Q8CA71 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Shisa4Q8CA71 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16■□□□□ 0.15
Shisa4Q8CA71 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16■□□□□ 0.15
Shisa4Q8CA71 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16■□□□□ 0.15
Shisa4Q8CA71 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Shisa4Q8CA71 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shisa4Q8CA71 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms