Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc60Q8C4J0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Gm42612-201ENSMUST00000197986 623 ntBASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Gm43170-201ENSMUST00000199827 612 ntBASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Syt7-205ENSMUST00000224135 1557 ntBASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc60Q8C4J0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc60Q8C4J0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Ccdc60Q8C4J0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.64■□□□□ 0.41
Ccdc60Q8C4J0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Gm24420-201ENSMUST00000176676 59 ntBASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Gm28760-201ENSMUST00000185995 736 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms