Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Gm12882-201ENSMUST00000121696 517 ntBASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Gm16379-201ENSMUST00000161469 348 ntBASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Gm8762-201ENSMUST00000193486 339 ntBASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Ighv1-86-201ENSMUST00000200562 353 ntBASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd9Q8BYH8 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Chd9Q8BYH8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.77□□□□□ -0.68
Chd9Q8BYH8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd9Q8BYH8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd9Q8BYH8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd9Q8BYH8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd9Q8BYH8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd9Q8BYH8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd9Q8BYH8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd9Q8BYH8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Gm9358-201ENSMUST00000183067 927 ntBASIC10.77□□□□□ -0.69
Chd9Q8BYH8 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.77□□□□□ -0.69
Chd9Q8BYH8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Gm14726-201ENSMUST00000120623 896 ntBASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Gm11964-201ENSMUST00000120982 444 ntBASIC10.76□□□□□ -0.69
Chd9Q8BYH8 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.76□□□□□ -0.69
Chd9Q8BYH8 AC126799.1-201ENSMUST00000221976 246 ntBASIC10.76□□□□□ -0.69
Chd9Q8BYH8 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Morn2-202ENSMUST00000227729 656 ntBASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms