Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm11524-201ENSMUST00000119349 807 ntBASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm19078-201ENSMUST00000206311 727 ntBASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap1Q8BTW8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap1Q8BTW8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdk5rap1Q8BTW8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm28911-201ENSMUST00000188837 117 ntBASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms