Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.17□□□□□ -0.14
Nup54Q8BTS4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Gm15823-201ENSMUST00000064305 670 ntBASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Gm19078-201ENSMUST00000206311 727 ntBASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Gm45668-201ENSMUST00000211271 493 ntBASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Gm18624-201ENSMUST00000220966 658 ntBASIC14.16□□□□□ -0.14
Nup54Q8BTS4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup54Q8BTS4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Mir6392-201ENSMUST00000184924 108 ntBASIC14.15□□□□□ -0.14
Nup54Q8BTS4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Gm44719-201ENSMUST00000206404 149 ntBASIC14.15□□□□□ -0.14
Nup54Q8BTS4 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.15□□□□□ -0.14
Nup54Q8BTS4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup54Q8BTS4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms