Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Gm5781-201ENSMUST00000219792 443 ntBASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col16a1Q8BLX7 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Gm11222-201ENSMUST00000119005 738 ntBASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col16a1Q8BLX7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Col16a1Q8BLX7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.8■□□□□ 0.44
Col16a1Q8BLX7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Gm13316-201ENSMUST00000140537 691 ntBASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Gm43138-201ENSMUST00000199123 708 ntBASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms