Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Gm25925-201ENSMUST00000158314 306 ntBASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdhr3Q8BL00 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Gm18041-201ENSMUST00000218210 618 ntBASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdhr3Q8BL00 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cdhr3Q8BL00 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdhr3Q8BL00 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdhr3Q8BL00 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdhr3Q8BL00 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdhr3Q8BL00 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdhr3Q8BL00 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdhr3Q8BL00 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms