Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 AA619741-201ENSMUST00000195095 646 ntBASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Chchd1-203ENSMUST00000224633 557 ntBASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc40Q8BI79 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Gm15957-201ENSMUST00000118893 974 ntBASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Gm24158-201ENSMUST00000175263 71 ntBASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Gm44608-201ENSMUST00000206827 855 ntBASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ccdc40Q8BI79 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Gm13823-201ENSMUST00000119930 345 ntBASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Gm6736-201ENSMUST00000166583 948 ntBASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Gm27702-201ENSMUST00000184512 56 ntBASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Gm37935-201ENSMUST00000192012 982 ntBASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms