Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.7□□□□□ -0.22
Ubp1Q811S7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.69□□□□□ -0.22
Ubp1Q811S7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.69□□□□□ -0.22
Ubp1Q811S7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ubp1Q811S7 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.68□□□□□ -0.22
Ubp1Q811S7 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.68□□□□□ -0.22
Ubp1Q811S7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.68□□□□□ -0.22
Ubp1Q811S7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Ubp1Q811S7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.67□□□□□ -0.22
Ubp1Q811S7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Gm12585-201ENSMUST00000117307 290 ntBASIC13.67□□□□□ -0.22
Ubp1Q811S7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms