Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf38bQ80SY5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Gm6244-201ENSMUST00000178732 841 ntBASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Gm27839-201ENSMUST00000184242 106 ntBASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf38bQ80SY5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Gm14660-201ENSMUST00000119809 575 ntBASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf38bQ80SY5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Gm27486-201ENSMUST00000184923 80 ntBASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Mir7654-201ENSMUST00000185082 70 ntBASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms