Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Gm43433-201ENSMUST00000196573 481 ntBASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh8Q7TSK3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Gm5279-201ENSMUST00000199575 745 ntBASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh8Q7TSK3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh8Q7TSK3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh8Q7TSK3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh8Q7TSK3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms