Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Gm13823-201ENSMUST00000119930 345 ntBASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Gm6222-201ENSMUST00000120787 396 ntBASIC13.19□□□□□ -0.3
Otub1Q7TQI3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.19□□□□□ -0.3
Otub1Q7TQI3 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.19□□□□□ -0.3
Otub1Q7TQI3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otub1Q7TQI3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Gm9824-201ENSMUST00000178707 561 ntBASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Gm18049-201ENSMUST00000208909 581 ntBASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otub1Q7TQI3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Otub1Q7TQI3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms