Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vma21Q78T54 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vma21Q78T54 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Vma21Q78T54 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vma21Q78T54 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vma21Q78T54 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vma21Q78T54 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vma21Q78T54 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vma21Q78T54 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Gm6222-201ENSMUST00000120787 396 ntBASIC11.27□□□□□ -0.61
Vma21Q78T54 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.27□□□□□ -0.61
Vma21Q78T54 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.27□□□□□ -0.61
Vma21Q78T54 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Vma21Q78T54 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vma21Q78T54 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Vma21Q78T54 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Vma21Q78T54 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Vma21Q78T54 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.26□□□□□ -0.61
Vma21Q78T54 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Vma21Q78T54 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.26□□□□□ -0.61
Vma21Q78T54 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Vma21Q78T54 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Vma21Q78T54 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.26□□□□□ -0.61
Vma21Q78T54 Gm27741-201ENSMUST00000185060 237 ntBASIC11.26□□□□□ -0.61
Vma21Q78T54 Gm18206-201ENSMUST00000207027 926 ntBASIC11.26□□□□□ -0.61
Vma21Q78T54 Gm45612-201ENSMUST00000211320 160 ntBASIC11.26□□□□□ -0.61
Vma21Q78T54 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.26□□□□□ -0.61
Vma21Q78T54 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.26□□□□□ -0.61
Vma21Q78T54 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Vma21Q78T54 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Vma21Q78T54 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.26□□□□□ -0.61
Vma21Q78T54 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms