Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scaf4Q6PFF0 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scaf4Q6PFF0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Gm29741-201ENSMUST00000192667 421 ntBASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms