Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf220Q6PDX6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf220Q6PDX6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Gm6550-201ENSMUST00000187574 993 ntBASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf220Q6PDX6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf220Q6PDX6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Gm24589-201ENSMUST00000116692 94 ntBASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Gm15173-201ENSMUST00000122049 433 ntBASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms