Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.64□□□□□ -0.23
VclQ64727 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
VclQ64727 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.64□□□□□ -0.23
VclQ64727 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VclQ64727 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.64□□□□□ -0.23
VclQ64727 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
VclQ64727 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VclQ64727 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VclQ64727 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.63□□□□□ -0.23
VclQ64727 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VclQ64727 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
VclQ64727 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.63□□□□□ -0.23
VclQ64727 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.63□□□□□ -0.23
VclQ64727 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
VclQ64727 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Gm9797-201ENSMUST00000052902 613 ntBASIC13.63□□□□□ -0.23
VclQ64727 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VclQ64727 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.62□□□□□ -0.23
VclQ64727 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VclQ64727 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Gm7488-201ENSMUST00000117148 684 ntBASIC13.62□□□□□ -0.23
VclQ64727 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.62□□□□□ -0.23
VclQ64727 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.62□□□□□ -0.23
VclQ64727 Gm29741-201ENSMUST00000192667 421 ntBASIC13.62□□□□□ -0.23
VclQ64727 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.62□□□□□ -0.23
VclQ64727 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.62□□□□□ -0.23
VclQ64727 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
VclQ64727 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VclQ64727 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.62□□□□□ -0.23
VclQ64727 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.62□□□□□ -0.23
VclQ64727 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VclQ64727 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
VclQ64727 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
VclQ64727 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
VclQ64727 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.61□□□□□ -0.23
VclQ64727 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.61□□□□□ -0.23
VclQ64727 Gm28760-201ENSMUST00000185995 736 ntBASIC13.61□□□□□ -0.23
VclQ64727 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.61□□□□□ -0.23
VclQ64727 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.61□□□□□ -0.23
VclQ64727 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms