Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn1Q64347 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn1Q64347 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Clcn1Q64347 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Clcn1Q64347 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn1Q64347 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.52■□□□□ 0.39
Clcn1Q64347 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn1Q64347 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn1Q64347 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.52■□□□□ 0.39
Clcn1Q64347 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.52■□□□□ 0.39
Clcn1Q64347 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn1Q64347 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn1Q64347 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Clcn1Q64347 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Clcn1Q64347 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.51■□□□□ 0.39
Clcn1Q64347 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Clcn1Q64347 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.51■□□□□ 0.39
Clcn1Q64347 Gm15198-201ENSMUST00000117283 177 ntBASIC17.51■□□□□ 0.39
Clcn1Q64347 Snora78-201ENSMUST00000158630 128 ntBASIC17.51■□□□□ 0.39
Clcn1Q64347 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.51■□□□□ 0.39
Clcn1Q64347 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.51■□□□□ 0.39
Clcn1Q64347 Gm29649-201ENSMUST00000185649 419 ntBASIC17.51■□□□□ 0.39
Clcn1Q64347 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.51■□□□□ 0.39
Clcn1Q64347 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.51■□□□□ 0.39
Clcn1Q64347 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.51■□□□□ 0.39
Clcn1Q64347 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.51■□□□□ 0.39
Clcn1Q64347 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Ntrk2-208ENSMUST00000225583 2719 ntBASIC17.51■□□□□ 0.39
Clcn1Q64347 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.51■□□□□ 0.39
Clcn1Q64347 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.51■□□□□ 0.39
Clcn1Q64347 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn1Q64347 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.5■□□□□ 0.39
Clcn1Q64347 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Clcn1Q64347 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Clcn1Q64347 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.5■□□□□ 0.39
Clcn1Q64347 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.5■□□□□ 0.39
Clcn1Q64347 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.5■□□□□ 0.39
Clcn1Q64347 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Clcn1Q64347 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.5■□□□□ 0.39
Clcn1Q64347 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Clcn1Q64347 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.5■□□□□ 0.39
Clcn1Q64347 Gm38671-201ENSMUST00000200573 130 ntBASIC17.5■□□□□ 0.39
Clcn1Q64347 Gm6983-201ENSMUST00000214912 628 ntBASIC17.5■□□□□ 0.39
Clcn1Q64347 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Clcn1Q64347 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Clcn1Q64347 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn1Q64347 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.49■□□□□ 0.39
Clcn1Q64347 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.49■□□□□ 0.39
Clcn1Q64347 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.49■□□□□ 0.39
Clcn1Q64347 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Clcn1Q64347 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.49■□□□□ 0.39
Clcn1Q64347 Gm27572-201ENSMUST00000183702 255 ntBASIC17.49■□□□□ 0.39
Clcn1Q64347 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.49■□□□□ 0.39
Clcn1Q64347 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.49■□□□□ 0.39
Clcn1Q64347 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.49■□□□□ 0.39
Clcn1Q64347 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.49■□□□□ 0.39
Clcn1Q64347 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.49■□□□□ 0.39
Clcn1Q64347 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clcn1Q64347 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Clcn1Q64347 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms