Protein–RNA interactions for Protein: Q62471

Lcn3, Vomeronasal secretory protein 1, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn3Q62471 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.03□□□□□ -0.48
Lcn3Q62471 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lcn3Q62471 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.03□□□□□ -0.48
Lcn3Q62471 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Gm7284-201ENSMUST00000131667 944 ntBASIC12.03□□□□□ -0.48
Lcn3Q62471 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.03□□□□□ -0.48
Lcn3Q62471 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Lcn3Q62471 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Lcn3Q62471 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lcn3Q62471 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lcn3Q62471 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lcn3Q62471 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lcn3Q62471 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lcn3Q62471 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lcn3Q62471 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lcn3Q62471 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lcn3Q62471 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Lcn3Q62471 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Gm12644-201ENSMUST00000119935 606 ntBASIC12.02□□□□□ -0.49
Lcn3Q62471 Gm12895-201ENSMUST00000122214 226 ntBASIC12.02□□□□□ -0.49
Lcn3Q62471 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.02□□□□□ -0.49
Lcn3Q62471 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Gm27357-201ENSMUST00000183754 135 ntBASIC12.02□□□□□ -0.49
Lcn3Q62471 Gm27646-201ENSMUST00000183989 110 ntBASIC12.02□□□□□ -0.49
Lcn3Q62471 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.02□□□□□ -0.49
Lcn3Q62471 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lcn3Q62471 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.02□□□□□ -0.49
Lcn3Q62471 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lcn3Q62471 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.02□□□□□ -0.49
Lcn3Q62471 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lcn3Q62471 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lcn3Q62471 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Lcn3Q62471 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.01□□□□□ -0.49
Lcn3Q62471 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Lcn3Q62471 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lcn3Q62471 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.01□□□□□ -0.49
Lcn3Q62471 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lcn3Q62471 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lcn3Q62471 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lcn3Q62471 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms