Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Foxc1Q61572 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.32□□□□□ -0.76
Foxc1Q61572 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Foxc1Q61572 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Foxc1Q61572 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm25109-201ENSMUST00000122474 114 ntBASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm17837-201ENSMUST00000186435 985 ntBASIC10.32□□□□□ -0.76
Foxc1Q61572 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm29011-201ENSMUST00000191059 712 ntBASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm37230-201ENSMUST00000194491 818 ntBASIC10.32□□□□□ -0.76
Foxc1Q61572 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.32□□□□□ -0.76
Foxc1Q61572 CT572999.1-201ENSMUST00000220315 1260 ntBASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm14005-208ENSMUST00000223654 681 ntBASIC10.32□□□□□ -0.76
Foxc1Q61572 AC154616.1-201ENSMUST00000226995 804 ntBASIC10.32□□□□□ -0.76
Foxc1Q61572 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Foxc1Q61572 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Foxc1Q61572 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Foxc1Q61572 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Foxc1Q61572 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Foxc1Q61572 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.32□□□□□ -0.76
Foxc1Q61572 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.31□□□□□ -0.76
Foxc1Q61572 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.31□□□□□ -0.76
Foxc1Q61572 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Gm12428-201ENSMUST00000119844 727 ntBASIC10.31□□□□□ -0.76
Foxc1Q61572 Gm14042-201ENSMUST00000120139 833 ntBASIC10.31□□□□□ -0.76
Foxc1Q61572 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Gm22923-201ENSMUST00000174952 110 ntBASIC10.31□□□□□ -0.76
Foxc1Q61572 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.31□□□□□ -0.76
Foxc1Q61572 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms