Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.99□□□□□ -0.33
Sox17Q61473 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.99□□□□□ -0.33
Sox17Q61473 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.99□□□□□ -0.33
Sox17Q61473 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.99□□□□□ -0.33
Sox17Q61473 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.99□□□□□ -0.33
Sox17Q61473 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.99□□□□□ -0.33
Sox17Q61473 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox17Q61473 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox17Q61473 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Sox17Q61473 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sox17Q61473 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox17Q61473 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox17Q61473 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Sox17Q61473 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox17Q61473 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox17Q61473 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox17Q61473 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox17Q61473 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Gm12882-201ENSMUST00000121696 517 ntBASIC12.98□□□□□ -0.33
Sox17Q61473 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Gm2445-201ENSMUST00000182798 989 ntBASIC12.98□□□□□ -0.33
Sox17Q61473 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.98□□□□□ -0.33
Sox17Q61473 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.98□□□□□ -0.33
Sox17Q61473 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.98□□□□□ -0.33
Sox17Q61473 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox17Q61473 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.98□□□□□ -0.33
Sox17Q61473 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.98□□□□□ -0.33
Sox17Q61473 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.98□□□□□ -0.33
Sox17Q61473 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox17Q61473 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sox17Q61473 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox17Q61473 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox17Q61473 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Sox17Q61473 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox17Q61473 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.97□□□□□ -0.33
Sox17Q61473 Gm17968-201ENSMUST00000194902 784 ntBASIC12.97□□□□□ -0.33
Sox17Q61473 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.97□□□□□ -0.33
Sox17Q61473 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.97□□□□□ -0.33
Sox17Q61473 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox17Q61473 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.97□□□□□ -0.33
Sox17Q61473 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Sox17Q61473 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox17Q61473 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.97□□□□□ -0.33
Sox17Q61473 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms