Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col12a1Q60847 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.37□□□□□ -0.27
Col12a1Q60847 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.37□□□□□ -0.27
Col12a1Q60847 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.37□□□□□ -0.27
Col12a1Q60847 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.37□□□□□ -0.27
Col12a1Q60847 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.37□□□□□ -0.27
Col12a1Q60847 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.37□□□□□ -0.27
Col12a1Q60847 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col12a1Q60847 Gm13665-201ENSMUST00000120830 528 ntBASIC13.37□□□□□ -0.27
Col12a1Q60847 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.37□□□□□ -0.27
Col12a1Q60847 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.37□□□□□ -0.27
Col12a1Q60847 Gm44069-201ENSMUST00000204898 506 ntBASIC13.37□□□□□ -0.27
Col12a1Q60847 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.37□□□□□ -0.27
Col12a1Q60847 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.37□□□□□ -0.27
Col12a1Q60847 Gm5950-201ENSMUST00000213337 772 ntBASIC13.37□□□□□ -0.27
Col12a1Q60847 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.36□□□□□ -0.27
Col12a1Q60847 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Gm11637-201ENSMUST00000120601 592 ntBASIC13.36□□□□□ -0.27
Col12a1Q60847 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Gm8365-201ENSMUST00000197334 648 ntBASIC13.36□□□□□ -0.27
Col12a1Q60847 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.36□□□□□ -0.27
Col12a1Q60847 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col12a1Q60847 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col12a1Q60847 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.36□□□□□ -0.27
Col12a1Q60847 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.36□□□□□ -0.27
Col12a1Q60847 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col12a1Q60847 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col12a1Q60847 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Gm8885-201ENSMUST00000189382 598 ntBASIC13.36□□□□□ -0.27
Col12a1Q60847 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Col12a1Q60847 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Col12a1Q60847 Gm17330-201ENSMUST00000221047 165 ntBASIC13.36□□□□□ -0.27
Col12a1Q60847 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Col12a1Q60847 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col12a1Q60847 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Gm23270-201ENSMUST00000104055 131 ntBASIC13.35□□□□□ -0.27
Col12a1Q60847 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col12a1Q60847 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.35□□□□□ -0.27
Col12a1Q60847 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.35□□□□□ -0.27
Col12a1Q60847 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.35□□□□□ -0.27
Col12a1Q60847 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col12a1Q60847 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col12a1Q60847 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.35□□□□□ -0.27
Col12a1Q60847 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col12a1Q60847 Gm11531-201ENSMUST00000117614 555 ntBASIC13.35□□□□□ -0.27
Col12a1Q60847 Gm45224-201ENSMUST00000208203 414 ntBASIC13.35□□□□□ -0.27
Col12a1Q60847 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col12a1Q60847 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Col12a1Q60847 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Gm12029-201ENSMUST00000120073 832 ntBASIC13.35□□□□□ -0.27
Col12a1Q60847 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms