Protein–RNA interactions for Protein: Q60670

Sik1, Serine/threonine-protein kinase SIK1, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sik1Q60670 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sik1Q60670 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sik1Q60670 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.43■□□□□ 0.38
Sik1Q60670 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sik1Q60670 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.43■□□□□ 0.38
Sik1Q60670 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sik1Q60670 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sik1Q60670 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sik1Q60670 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sik1Q60670 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Sik1Q60670 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Sik1Q60670 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sik1Q60670 Gm8805-201ENSMUST00000117848 313 ntBASIC17.42■□□□□ 0.38
Sik1Q60670 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.42■□□□□ 0.38
Sik1Q60670 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.42■□□□□ 0.38
Sik1Q60670 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sik1Q60670 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sik1Q60670 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.42■□□□□ 0.38
Sik1Q60670 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.42■□□□□ 0.38
Sik1Q60670 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Sik1Q60670 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sik1Q60670 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sik1Q60670 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
Sik1Q60670 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sik1Q60670 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.41■□□□□ 0.38
Sik1Q60670 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sik1Q60670 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sik1Q60670 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Gm3890-201ENSMUST00000182416 207 ntBASIC17.41■□□□□ 0.38
Sik1Q60670 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC17.41■□□□□ 0.38
Sik1Q60670 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.41■□□□□ 0.38
Sik1Q60670 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.41■□□□□ 0.38
Sik1Q60670 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sik1Q60670 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 Gm8793-201ENSMUST00000183069 1303 ntBASIC17.41■□□□□ 0.38
Sik1Q60670 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Sik1Q60670 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sik1Q60670 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Sik1Q60670 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sik1Q60670 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.4■□□□□ 0.38
Sik1Q60670 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sik1Q60670 Gm12176-201ENSMUST00000121420 875 ntBASIC17.4■□□□□ 0.38
Sik1Q60670 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.4■□□□□ 0.38
Sik1Q60670 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.4■□□□□ 0.38
Sik1Q60670 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC17.4■□□□□ 0.38
Sik1Q60670 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.4■□□□□ 0.38
Sik1Q60670 Gm16505-201ENSMUST00000179981 232 ntBASIC17.4■□□□□ 0.38
Sik1Q60670 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.4■□□□□ 0.38
Sik1Q60670 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.4■□□□□ 0.38
Sik1Q60670 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.4■□□□□ 0.38
Sik1Q60670 AC122371.3-201ENSMUST00000223402 1061 ntBASIC17.4■□□□□ 0.38
Sik1Q60670 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.4■□□□□ 0.38
Sik1Q60670 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.4■□□□□ 0.38
Sik1Q60670 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sik1Q60670 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sik1Q60670 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 117 ms