Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Gm18473-201ENSMUST00000220543 868 ntBASIC16.44■□□□□ 0.22
Spg7Q3ULF4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Gm10012-201ENSMUST00000078252 192 ntBASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg7Q3ULF4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.43■□□□□ 0.22
Spg7Q3ULF4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Gm17330-201ENSMUST00000221047 165 ntBASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Gm6091-201ENSMUST00000098307 165 ntBASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg7Q3ULF4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.42■□□□□ 0.22
Spg7Q3ULF4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Gm12742-201ENSMUST00000117326 410 ntBASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Gm13226-201ENSMUST00000117838 404 ntBASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Gm45841-201ENSMUST00000207700 164 ntBASIC16.41■□□□□ 0.22
Spg7Q3ULF4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg7Q3ULF4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms