Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Gm12138-201ENSMUST00000122180 951 ntBASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Gm28760-201ENSMUST00000185995 736 ntBASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Gm10766-202ENSMUST00000194123 606 ntBASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 AA619741-201ENSMUST00000195095 646 ntBASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Gm6916-202ENSMUST00000205523 195 ntBASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Gm9908-201ENSMUST00000211534 448 ntBASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Khdc4Q3TCX3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Khdc4Q3TCX3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Khdc4Q3TCX3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Khdc4Q3TCX3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.21□□□□□ -0.3
Khdc4Q3TCX3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Khdc4Q3TCX3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Gm6912-201ENSMUST00000117218 544 ntBASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Gm11478-201ENSMUST00000117851 599 ntBASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Gm37917-201ENSMUST00000194711 392 ntBASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Khdc4Q3TCX3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Khdc4Q3TCX3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms