Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Q3KNL4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.62□□□□□ -0.23
Q3KNL4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.62□□□□□ -0.23
Q3KNL4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Gm13823-201ENSMUST00000119930 345 ntBASIC13.62□□□□□ -0.23
Q3KNL4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Mir1895-201ENSMUST00000122615 79 ntBASIC13.62□□□□□ -0.23
Q3KNL4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.62□□□□□ -0.23
Q3KNL4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.62□□□□□ -0.23
Q3KNL4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.62□□□□□ -0.23
Q3KNL4 AA619741-201ENSMUST00000195095 646 ntBASIC13.62□□□□□ -0.23
Q3KNL4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.62□□□□□ -0.23
Q3KNL4 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.62□□□□□ -0.23
Q3KNL4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Q3KNL4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Q3KNL4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Q3KNL4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Q3KNL4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.61□□□□□ -0.23
Q3KNL4 Gm6443-201ENSMUST00000203599 874 ntBASIC13.61□□□□□ -0.23
Q3KNL4 Gm18049-201ENSMUST00000208909 581 ntBASIC13.61□□□□□ -0.23
Q3KNL4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Q3KNL4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Q3KNL4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3KNL4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Q3KNL4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Q3KNL4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Q3KNL4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Q3KNL4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.6□□□□□ -0.23
Q3KNL4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Q3KNL4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.6□□□□□ -0.23
Q3KNL4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Q3KNL4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Q3KNL4 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.6□□□□□ -0.23
Q3KNL4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Gm18889-201ENSMUST00000174284 929 ntBASIC13.6□□□□□ -0.23
Q3KNL4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Q3KNL4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.6□□□□□ -0.23
Q3KNL4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.6□□□□□ -0.23
Q3KNL4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Q3KNL4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.6□□□□□ -0.23
Q3KNL4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Q3KNL4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Q3KNL4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms