Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.27□□□□□ -0.29
Hoxc4Q08624 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.27□□□□□ -0.29
Hoxc4Q08624 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.27□□□□□ -0.29
Hoxc4Q08624 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.27□□□□□ -0.29
Hoxc4Q08624 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.27□□□□□ -0.29
Hoxc4Q08624 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc4Q08624 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.26□□□□□ -0.29
Hoxc4Q08624 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Gm38671-201ENSMUST00000200573 130 ntBASIC13.26□□□□□ -0.29
Hoxc4Q08624 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxc4Q08624 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.26□□□□□ -0.29
Hoxc4Q08624 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.26□□□□□ -0.29
Hoxc4Q08624 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc4Q08624 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.25□□□□□ -0.29
Hoxc4Q08624 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.25□□□□□ -0.29
Hoxc4Q08624 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.25□□□□□ -0.29
Hoxc4Q08624 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Gm24196-201ENSMUST00000179161 110 ntBASIC13.25□□□□□ -0.29
Hoxc4Q08624 Gm8652-201ENSMUST00000181363 964 ntBASIC13.25□□□□□ -0.29
Hoxc4Q08624 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxc4Q08624 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc4Q08624 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms