Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Gm25144-201ENSMUST00000179561 110 ntBASIC13.94□□□□□ -0.18
Pfdn6Q03958 Gm25352-201ENSMUST00000179815 110 ntBASIC13.94□□□□□ -0.18
Pfdn6Q03958 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.94□□□□□ -0.18
Pfdn6Q03958 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Dupd1-202ENSMUST00000224735 548 ntBASIC13.94□□□□□ -0.18
Pfdn6Q03958 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pfdn6Q03958 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Gm14701-201ENSMUST00000117156 348 ntBASIC13.93□□□□□ -0.18
Pfdn6Q03958 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Gm15693-201ENSMUST00000120470 637 ntBASIC13.93□□□□□ -0.18
Pfdn6Q03958 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Gm43575-201ENSMUST00000196420 516 ntBASIC13.93□□□□□ -0.18
Pfdn6Q03958 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.93□□□□□ -0.18
Pfdn6Q03958 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Gm16476-201ENSMUST00000221544 139 ntBASIC13.93□□□□□ -0.18
Pfdn6Q03958 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.93□□□□□ -0.18
Pfdn6Q03958 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.93□□□□□ -0.18
Pfdn6Q03958 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
Pfdn6Q03958 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.93□□□□□ -0.18
Pfdn6Q03958 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.93□□□□□ -0.18
Pfdn6Q03958 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.93□□□□□ -0.18
Pfdn6Q03958 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pfdn6Q03958 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms