Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VcpQ01853 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Gm10275-202ENSMUST00000168697 495 ntBASIC14.79□□□□□ -0.04
VcpQ01853 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VcpQ01853 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.79□□□□□ -0.04
VcpQ01853 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
VcpQ01853 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.79□□□□□ -0.04
VcpQ01853 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Gm10766-202ENSMUST00000194123 606 ntBASIC14.79□□□□□ -0.04
VcpQ01853 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.79□□□□□ -0.04
VcpQ01853 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Gm10275-201ENSMUST00000092620 635 ntBASIC14.79□□□□□ -0.04
VcpQ01853 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VcpQ01853 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.78□□□□□ -0.04
VcpQ01853 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VcpQ01853 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.78□□□□□ -0.04
VcpQ01853 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.78□□□□□ -0.04
VcpQ01853 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.78□□□□□ -0.04
VcpQ01853 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
VcpQ01853 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.78□□□□□ -0.04
VcpQ01853 Gm9002-201ENSMUST00000178437 499 ntBASIC14.78□□□□□ -0.04
VcpQ01853 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VcpQ01853 Mir6392-201ENSMUST00000184924 108 ntBASIC14.78□□□□□ -0.04
VcpQ01853 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.78□□□□□ -0.04
VcpQ01853 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Dupd1-202ENSMUST00000224735 548 ntBASIC14.78□□□□□ -0.04
VcpQ01853 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
VcpQ01853 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VcpQ01853 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.78□□□□□ -0.04
VcpQ01853 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcpQ01853 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.78□□□□□ -0.04
VcpQ01853 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcpQ01853 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcpQ01853 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcpQ01853 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcpQ01853 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcpQ01853 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcpQ01853 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcpQ01853 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcpQ01853 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.77□□□□□ -0.04
VcpQ01853 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcpQ01853 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
VcpQ01853 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.77□□□□□ -0.05
VcpQ01853 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.77□□□□□ -0.05
VcpQ01853 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Gm8584-201ENSMUST00000171982 758 ntBASIC14.77□□□□□ -0.05
VcpQ01853 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Gm27631-201ENSMUST00000184163 466 ntBASIC14.77□□□□□ -0.05
VcpQ01853 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.77□□□□□ -0.05
VcpQ01853 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.77□□□□□ -0.05
VcpQ01853 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.77□□□□□ -0.05
VcpQ01853 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
VcpQ01853 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcpQ01853 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcpQ01853 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
VcpQ01853 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcpQ01853 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VcpQ01853 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcpQ01853 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.76□□□□□ -0.05
VcpQ01853 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VcpQ01853 Mir1247-201ENSMUST00000116706 82 ntBASIC14.76□□□□□ -0.05
VcpQ01853 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms