Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.08□□□□□ -0.15
Gabpb1Q00420 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gabpb1Q00420 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Gabpb1Q00420 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gabpb1Q00420 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.08□□□□□ -0.15
Gabpb1Q00420 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gabpb1Q00420 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Gm12585-201ENSMUST00000117307 290 ntBASIC14.08□□□□□ -0.16
Gabpb1Q00420 Gm3436-201ENSMUST00000179930 840 ntBASIC14.08□□□□□ -0.16
Gabpb1Q00420 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.08□□□□□ -0.16
Gabpb1Q00420 Gm44344-201ENSMUST00000200287 129 ntBASIC14.08□□□□□ -0.16
Gabpb1Q00420 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabpb1Q00420 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.07□□□□□ -0.16
Gabpb1Q00420 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Gm13616-201ENSMUST00000120600 222 ntBASIC14.07□□□□□ -0.16
Gabpb1Q00420 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.07□□□□□ -0.16
Gabpb1Q00420 Gm5425-201ENSMUST00000214125 459 ntBASIC14.07□□□□□ -0.16
Gabpb1Q00420 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.07□□□□□ -0.16
Gabpb1Q00420 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.07□□□□□ -0.16
Gabpb1Q00420 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabpb1Q00420 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.06□□□□□ -0.16
Gabpb1Q00420 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Gm27321-201ENSMUST00000185021 205 ntBASIC14.06□□□□□ -0.16
Gabpb1Q00420 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Gm10766-202ENSMUST00000194123 606 ntBASIC14.06□□□□□ -0.16
Gabpb1Q00420 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.06□□□□□ -0.16
Gabpb1Q00420 Gm6888-201ENSMUST00000221983 706 ntBASIC14.06□□□□□ -0.16
Gabpb1Q00420 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms