Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm44397-201ENSMUST00000195950 113 ntBASIC12.78□□□□□ -0.36
Cacna1aP97445 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.78□□□□□ -0.36
Cacna1aP97445 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.78□□□□□ -0.36
Cacna1aP97445 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cacna1aP97445 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cacna1aP97445 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.78□□□□□ -0.36
Cacna1aP97445 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cacna1aP97445 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cacna1aP97445 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Cacna1aP97445 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cacna1aP97445 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cacna1aP97445 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cacna1aP97445 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.77□□□□□ -0.36
Cacna1aP97445 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.77□□□□□ -0.36
Cacna1aP97445 Gm13342-201ENSMUST00000121055 207 ntBASIC12.77□□□□□ -0.36
Cacna1aP97445 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.77□□□□□ -0.36
Cacna1aP97445 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.77□□□□□ -0.36
Cacna1aP97445 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cacna1aP97445 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.77□□□□□ -0.36
Cacna1aP97445 Gm38266-201ENSMUST00000194931 421 ntBASIC12.77□□□□□ -0.36
Cacna1aP97445 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.77□□□□□ -0.37
Cacna1aP97445 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.77□□□□□ -0.37
Cacna1aP97445 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.77□□□□□ -0.37
Cacna1aP97445 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.77□□□□□ -0.37
Cacna1aP97445 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Gm27682-201ENSMUST00000183930 110 ntBASIC12.77□□□□□ -0.37
Cacna1aP97445 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.77□□□□□ -0.37
Cacna1aP97445 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.77□□□□□ -0.37
Cacna1aP97445 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cacna1aP97445 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cacna1aP97445 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.76□□□□□ -0.37
Cacna1aP97445 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.76□□□□□ -0.37
Cacna1aP97445 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Efs-202ENSMUST00000227037 2540 ntBASIC12.76□□□□□ -0.37
Cacna1aP97445 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.76□□□□□ -0.37
Cacna1aP97445 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.76□□□□□ -0.37
Cacna1aP97445 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.76□□□□□ -0.37
Cacna1aP97445 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Snora73a-201ENSMUST00000082453 205 ntBASIC12.76□□□□□ -0.37
Cacna1aP97445 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.76□□□□□ -0.37
Cacna1aP97445 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.76□□□□□ -0.37
Cacna1aP97445 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.76□□□□□ -0.37
Cacna1aP97445 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.76□□□□□ -0.37
Cacna1aP97445 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Cacna1aP97445 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Cacna1aP97445 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Gm16177-201ENSMUST00000120728 718 ntBASIC12.76□□□□□ -0.37
Cacna1aP97445 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.76□□□□□ -0.37
Cacna1aP97445 Gm24420-201ENSMUST00000176676 59 ntBASIC12.76□□□□□ -0.37
Cacna1aP97445 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Gm37986-201ENSMUST00000193285 383 ntBASIC12.76□□□□□ -0.37
Cacna1aP97445 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.76□□□□□ -0.37
Cacna1aP97445 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cacna1aP97445 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cacna1aP97445 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms