Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.05■□□□□ -0
Trim43cP86449 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim43cP86449 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43cP86449 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.04■□□□□ -0
Trim43cP86449 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.04■□□□□ -0
Trim43cP86449 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim43cP86449 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.04■□□□□ -0
Trim43cP86449 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim43cP86449 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.04■□□□□ -0
Trim43cP86449 Gm24694-201ENSMUST00000180054 110 ntBASIC15.04■□□□□ -0
Trim43cP86449 Mir8102-201ENSMUST00000184148 139 ntBASIC15.04■□□□□ -0
Trim43cP86449 Gm27663-201ENSMUST00000184839 110 ntBASIC15.04■□□□□ -0
Trim43cP86449 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.04■□□□□ -0
Trim43cP86449 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim43cP86449 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim43cP86449 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim43cP86449 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim43cP86449 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Trim43cP86449 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim43cP86449 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim43cP86449 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43cP86449 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.03■□□□□ -0
Trim43cP86449 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim43cP86449 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Gm24420-201ENSMUST00000176676 59 ntBASIC15.03■□□□□ -0
Trim43cP86449 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.03■□□□□ -0
Trim43cP86449 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.03■□□□□ -0
Trim43cP86449 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.03■□□□□ -0
Trim43cP86449 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim43cP86449 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trim43cP86449 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim43cP86449 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43cP86449 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim43cP86449 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43cP86449 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.02■□□□□ -0
Trim43cP86449 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43cP86449 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.02■□□□□ -0
Trim43cP86449 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43cP86449 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim43cP86449 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.02■□□□□ -0
Trim43cP86449 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43cP86449 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms