Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim43bP86448 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim43bP86448 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.29□□□□□ -0.12
Trim43bP86448 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Gm9182-201ENSMUST00000217829 639 ntBASIC14.29□□□□□ -0.12
Trim43bP86448 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.29□□□□□ -0.12
Trim43bP86448 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Trim43bP86448 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim43bP86448 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.29□□□□□ -0.12
Trim43bP86448 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim43bP86448 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43bP86448 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim43bP86448 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Gm15693-201ENSMUST00000120470 637 ntBASIC14.28□□□□□ -0.12
Trim43bP86448 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim43bP86448 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Gm25948-201ENSMUST00000175334 112 ntBASIC14.28□□□□□ -0.12
Trim43bP86448 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim43bP86448 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43bP86448 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim43bP86448 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.27□□□□□ -0.12
Trim43bP86448 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43bP86448 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim43bP86448 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 AA543401-201ENSMUST00000164248 1269 ntBASIC14.27□□□□□ -0.13
Trim43bP86448 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim43bP86448 Gm27920-201ENSMUST00000183953 96 ntBASIC14.27□□□□□ -0.13
Trim43bP86448 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.27□□□□□ -0.13
Trim43bP86448 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim43bP86448 Gm18049-201ENSMUST00000208909 581 ntBASIC14.27□□□□□ -0.13
Trim43bP86448 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Trim43bP86448 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.27□□□□□ -0.13
Trim43bP86448 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim43bP86448 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.27□□□□□ -0.13
Trim43bP86448 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim43bP86448 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43bP86448 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim43bP86448 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms