Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gbx1P82976 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gbx1P82976 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gbx1P82976 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Gbx1P82976 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gbx1P82976 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gbx1P82976 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gbx1P82976 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gbx1P82976 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Gbx1P82976 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Gbx1P82976 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gbx1P82976 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gbx1P82976 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gbx1P82976 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Gbx1P82976 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Gbx1P82976 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.03□□□□□ -0.32
Gbx1P82976 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Gbx1P82976 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Gbx1P82976 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.03□□□□□ -0.32
Gbx1P82976 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Gbx1P82976 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.03□□□□□ -0.32
Gbx1P82976 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Gm14822-201ENSMUST00000122247 291 ntBASIC13.03□□□□□ -0.32
Gbx1P82976 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.03□□□□□ -0.32
Gbx1P82976 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.03□□□□□ -0.32
Gbx1P82976 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.03□□□□□ -0.32
Gbx1P82976 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Gm18027-201ENSMUST00000218947 619 ntBASIC13.03□□□□□ -0.32
Gbx1P82976 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Gbx1P82976 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Gbx1P82976 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Gbx1P82976 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.03□□□□□ -0.32
Gbx1P82976 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Gbx1P82976 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gbx1P82976 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.02□□□□□ -0.32
Gbx1P82976 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gbx1P82976 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gbx1P82976 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gbx1P82976 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.02□□□□□ -0.32
Gbx1P82976 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
Gbx1P82976 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gbx1P82976 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gbx1P82976 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.02□□□□□ -0.32
Gbx1P82976 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gbx1P82976 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gbx1P82976 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gbx1P82976 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Gbx1P82976 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gbx1P82976 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gbx1P82976 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Gbx1P82976 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Gbx1P82976 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.02□□□□□ -0.33
Gbx1P82976 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Gbx1P82976 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.02□□□□□ -0.33
Gbx1P82976 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Gbx1P82976 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Gbx1P82976 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Gbx1P82976 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.02□□□□□ -0.33
Gbx1P82976 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Gbx1P82976 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Gbx1P82976 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gbx1P82976 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gbx1P82976 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gbx1P82976 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Gbx1P82976 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gbx1P82976 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gbx1P82976 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gbx1P82976 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gbx1P82976 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms