Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Msh6P54276 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.44■□□□□ 0.38
Msh6P54276 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.43■□□□□ 0.38
Msh6P54276 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Gm22018-201ENSMUST00000104357 131 ntBASIC17.43■□□□□ 0.38
Msh6P54276 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Msh6P54276 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Msh6P54276 Gm5687-201ENSMUST00000118252 640 ntBASIC17.43■□□□□ 0.38
Msh6P54276 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.43■□□□□ 0.38
Msh6P54276 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Gm5161-201ENSMUST00000075243 853 ntBASIC17.43■□□□□ 0.38
Msh6P54276 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Msh6P54276 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Msh6P54276 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh6P54276 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Msh6P54276 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Msh6P54276 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.42■□□□□ 0.38
Msh6P54276 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.42■□□□□ 0.38
Msh6P54276 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Msh6P54276 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.42■□□□□ 0.38
Msh6P54276 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Msh6P54276 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.42■□□□□ 0.38
Msh6P54276 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh6P54276 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.42■□□□□ 0.38
Msh6P54276 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Msh6P54276 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.41■□□□□ 0.38
Msh6P54276 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.41■□□□□ 0.38
Msh6P54276 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.41■□□□□ 0.38
Msh6P54276 Gm27682-201ENSMUST00000183930 110 ntBASIC17.41■□□□□ 0.38
Msh6P54276 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.41■□□□□ 0.38
Msh6P54276 Gm18827-201ENSMUST00000188341 790 ntBASIC17.41■□□□□ 0.38
Msh6P54276 Gm38241-201ENSMUST00000192641 898 ntBASIC17.41■□□□□ 0.38
Msh6P54276 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Gm45880-201ENSMUST00000213041 853 ntBASIC17.41■□□□□ 0.38
Msh6P54276 Gm45930-201ENSMUST00000221330 292 ntBASIC17.41■□□□□ 0.38
Msh6P54276 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Msh6P54276 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Msh6P54276 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.41■□□□□ 0.38
Msh6P54276 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Msh6P54276 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh6P54276 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.4■□□□□ 0.38
Msh6P54276 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.4■□□□□ 0.38
Msh6P54276 Gm29608-201ENSMUST00000190444 463 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms