Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.12□□□□□ -0.31
RoraP51448 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.12□□□□□ -0.31
RoraP51448 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.12□□□□□ -0.31
RoraP51448 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RoraP51448 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Gm15240-201ENSMUST00000118156 720 ntBASIC13.12□□□□□ -0.31
RoraP51448 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RoraP51448 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.12□□□□□ -0.31
RoraP51448 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RoraP51448 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.12□□□□□ -0.31
RoraP51448 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
RoraP51448 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RoraP51448 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RoraP51448 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.12□□□□□ -0.31
RoraP51448 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RoraP51448 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RoraP51448 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.11□□□□□ -0.31
RoraP51448 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RoraP51448 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.11□□□□□ -0.31
RoraP51448 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Gm12341-201ENSMUST00000119724 503 ntBASIC13.11□□□□□ -0.31
RoraP51448 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.11□□□□□ -0.31
RoraP51448 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.11□□□□□ -0.31
RoraP51448 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RoraP51448 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RoraP51448 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RoraP51448 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.1□□□□□ -0.31
RoraP51448 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RoraP51448 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RoraP51448 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RoraP51448 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RoraP51448 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RoraP51448 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RoraP51448 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RoraP51448 Gm11478-201ENSMUST00000117851 599 ntBASIC13.1□□□□□ -0.31
RoraP51448 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RoraP51448 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RoraP51448 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.1□□□□□ -0.31
RoraP51448 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RoraP51448 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.1□□□□□ -0.31
RoraP51448 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RoraP51448 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.1□□□□□ -0.31
RoraP51448 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RoraP51448 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.1□□□□□ -0.31
RoraP51448 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RoraP51448 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms