Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm10766-202ENSMUST00000194123 606 ntBASIC16.46■□□□□ 0.23
Ercc3P49135 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.46■□□□□ 0.23
Ercc3P49135 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ercc3P49135 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.46■□□□□ 0.23
Ercc3P49135 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.46■□□□□ 0.23
Ercc3P49135 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ercc3P49135 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ercc3P49135 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ercc3P49135 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ercc3P49135 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ercc3P49135 Gm12585-201ENSMUST00000117307 290 ntBASIC16.45■□□□□ 0.22
Ercc3P49135 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Ercc3P49135 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.45■□□□□ 0.22
Ercc3P49135 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.45■□□□□ 0.22
Ercc3P49135 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.45■□□□□ 0.22
Ercc3P49135 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ercc3P49135 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Ercc3P49135 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ercc3P49135 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.45■□□□□ 0.22
Ercc3P49135 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.45■□□□□ 0.22
Ercc3P49135 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ercc3P49135 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Ercc3P49135 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.44■□□□□ 0.22
Ercc3P49135 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Ercc3P49135 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.44■□□□□ 0.22
Ercc3P49135 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.44■□□□□ 0.22
Ercc3P49135 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.44■□□□□ 0.22
Ercc3P49135 Gm21854-201ENSMUST00000179901 471 ntBASIC16.44■□□□□ 0.22
Ercc3P49135 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.44■□□□□ 0.22
Ercc3P49135 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.44■□□□□ 0.22
Ercc3P49135 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ercc3P49135 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.44■□□□□ 0.22
Ercc3P49135 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ercc3P49135 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.44■□□□□ 0.22
Ercc3P49135 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ercc3P49135 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ercc3P49135 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ercc3P49135 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
Ercc3P49135 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc3P49135 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc3P49135 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.43■□□□□ 0.22
Ercc3P49135 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc3P49135 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc3P49135 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc3P49135 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ercc3P49135 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ercc3P49135 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc3P49135 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.43■□□□□ 0.22
Ercc3P49135 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc3P49135 Gm5866-201ENSMUST00000177881 973 ntBASIC16.43■□□□□ 0.22
Ercc3P49135 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms