Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.53□□□□□ -0.4
Rfx3P48381 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Rfx3P48381 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rfx3P48381 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rfx3P48381 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.53□□□□□ -0.4
Rfx3P48381 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.53□□□□□ -0.4
Rfx3P48381 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.53□□□□□ -0.4
Rfx3P48381 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.53□□□□□ -0.4
Rfx3P48381 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.53□□□□□ -0.4
Rfx3P48381 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.53□□□□□ -0.4
Rfx3P48381 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.53□□□□□ -0.4
Rfx3P48381 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rfx3P48381 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rfx3P48381 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.53□□□□□ -0.4
Rfx3P48381 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx3P48381 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx3P48381 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.52□□□□□ -0.4
Rfx3P48381 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx3P48381 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx3P48381 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx3P48381 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.52□□□□□ -0.4
Rfx3P48381 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx3P48381 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx3P48381 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx3P48381 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.52□□□□□ -0.4
Rfx3P48381 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx3P48381 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx3P48381 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rfx3P48381 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.52□□□□□ -0.41
Rfx3P48381 Gm8584-201ENSMUST00000171982 758 ntBASIC12.52□□□□□ -0.41
Rfx3P48381 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Gm18049-201ENSMUST00000208909 581 ntBASIC12.52□□□□□ -0.41
Rfx3P48381 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.52□□□□□ -0.41
Rfx3P48381 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rfx3P48381 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx3P48381 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.52□□□□□ -0.41
Rfx3P48381 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx3P48381 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx3P48381 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx3P48381 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx3P48381 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx3P48381 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx3P48381 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rfx3P48381 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx3P48381 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.51□□□□□ -0.41
Rfx3P48381 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx3P48381 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rfx3P48381 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx3P48381 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rfx3P48381 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx3P48381 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.51□□□□□ -0.41
Rfx3P48381 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.51□□□□□ -0.41
Rfx3P48381 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.51□□□□□ -0.41
Rfx3P48381 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx3P48381 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.51□□□□□ -0.41
Rfx3P48381 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.51□□□□□ -0.41
Rfx3P48381 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rfx3P48381 Mir6990-201ENSMUST00000183724 91 ntBASIC12.51□□□□□ -0.41
Rfx3P48381 Gm29310-201ENSMUST00000185468 696 ntBASIC12.51□□□□□ -0.41
Rfx3P48381 Gm21825-201ENSMUST00000185728 696 ntBASIC12.51□□□□□ -0.41
Rfx3P48381 Gm29109-201ENSMUST00000185895 696 ntBASIC12.51□□□□□ -0.41
Rfx3P48381 Gm21896-201ENSMUST00000186520 696 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms