Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Chd1P40201 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Chd1P40201 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Chd1P40201 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1P40201 Gm44981-201ENSMUST00000205549 1943 ntBASIC20.35■□□□□ 0.85
Chd1P40201 Gm45495-201ENSMUST00000200940 1700 ntBASIC20.35■□□□□ 0.85
Chd1P40201 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1P40201 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1P40201 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1P40201 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1P40201 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC20.35■□□□□ 0.85
Chd1P40201 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC20.35■□□□□ 0.85
Chd1P40201 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Chd1P40201 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1P40201 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1P40201 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC20.35■□□□□ 0.85
Chd1P40201 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC20.35■□□□□ 0.85
Chd1P40201 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Chd1P40201 Gm38297-201ENSMUST00000195122 1057 ntBASIC20.35■□□□□ 0.85
Chd1P40201 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC20.35■□□□□ 0.85
Chd1P40201 Gm18730-201ENSMUST00000218038 343 ntBASIC20.35■□□□□ 0.85
Chd1P40201 Gzmn-202ENSMUST00000225535 989 ntBASIC20.35■□□□□ 0.85
Chd1P40201 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1P40201 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1P40201 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Chd1P40201 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1P40201 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Gm12266-201ENSMUST00000120311 962 ntBASIC20.34■□□□□ 0.85
Chd1P40201 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC20.34■□□□□ 0.85
Chd1P40201 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC20.34■□□□□ 0.85
Chd1P40201 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC20.34■□□□□ 0.85
Chd1P40201 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC20.34■□□□□ 0.85
Chd1P40201 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1P40201 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Chd1P40201 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC20.33■□□□□ 0.85
Chd1P40201 AC154222.2-201ENSMUST00000225848 607 ntBASIC20.33■□□□□ 0.85
Chd1P40201 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd1P40201 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd1P40201 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Chd1P40201 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC20.33■□□□□ 0.85
Chd1P40201 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd1P40201 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Chd1P40201 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd1P40201 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd1P40201 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC20.33■□□□□ 0.84
Chd1P40201 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC20.33■□□□□ 0.84
Chd1P40201 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1P40201 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Chd1P40201 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1P40201 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1P40201 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1P40201 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1P40201 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1P40201 Gm13736-201ENSMUST00000119272 253 ntBASIC20.32■□□□□ 0.84
Chd1P40201 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Chd1P40201 Mir6546-201ENSMUST00000184460 62 ntBASIC20.32■□□□□ 0.84
Chd1P40201 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC20.32■□□□□ 0.84
Chd1P40201 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC20.32■□□□□ 0.84
Chd1P40201 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1P40201 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1P40201 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1P40201 Gm38157-201ENSMUST00000194178 1698 ntBASIC20.32■□□□□ 0.84
Chd1P40201 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1P40201 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Chd1P40201 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1P40201 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1P40201 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Chd1P40201 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC20.31■□□□□ 0.84
Chd1P40201 Gm44651-201ENSMUST00000207343 372 ntBASIC20.31■□□□□ 0.84
Chd1P40201 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC20.31■□□□□ 0.84
Chd1P40201 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1P40201 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1P40201 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1P40201 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1P40201 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Chd1P40201 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Chd1P40201 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC20.31■□□□□ 0.84
Chd1P40201 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC20.31■□□□□ 0.84
Chd1P40201 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1P40201 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC20.3■□□□□ 0.84
Chd1P40201 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
Chd1P40201 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms