Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.96□□□□□ -0.17
Fen1P39749 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.96□□□□□ -0.17
Fen1P39749 Gm14140-201ENSMUST00000119999 995 ntBASIC13.96□□□□□ -0.17
Fen1P39749 Gm15483-201ENSMUST00000120338 456 ntBASIC13.96□□□□□ -0.17
Fen1P39749 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.96□□□□□ -0.17
Fen1P39749 Gm27301-201ENSMUST00000184012 127 ntBASIC13.96□□□□□ -0.17
Fen1P39749 Gm45747-201ENSMUST00000212203 999 ntBASIC13.96□□□□□ -0.17
Fen1P39749 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.96□□□□□ -0.17
Fen1P39749 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.96□□□□□ -0.17
Fen1P39749 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Fen1P39749 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fen1P39749 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fen1P39749 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Fen1P39749 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.96□□□□□ -0.18
Fen1P39749 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fen1P39749 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.96□□□□□ -0.18
Fen1P39749 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fen1P39749 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Fen1P39749 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Fen1P39749 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Fen1P39749 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.95□□□□□ -0.18
Fen1P39749 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Gm6736-201ENSMUST00000166583 948 ntBASIC13.95□□□□□ -0.18
Fen1P39749 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.95□□□□□ -0.18
Fen1P39749 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Fen1P39749 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fen1P39749 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Fen1P39749 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Fen1P39749 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Fen1P39749 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.94□□□□□ -0.18
Fen1P39749 Gm9385-201ENSMUST00000117563 472 ntBASIC13.94□□□□□ -0.18
Fen1P39749 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.94□□□□□ -0.18
Fen1P39749 Gm5177-201ENSMUST00000183092 997 ntBASIC13.94□□□□□ -0.18
Fen1P39749 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Fen1P39749 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Fen1P39749 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.94□□□□□ -0.18
Fen1P39749 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fen1P39749 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.93□□□□□ -0.18
Fen1P39749 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Fen1P39749 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Fen1P39749 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Fen1P39749 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.93□□□□□ -0.18
Fen1P39749 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms