Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk2P38575 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk2P38575 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk2P38575 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk2P38575 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk2P38575 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk2P38575 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.17□□□□□ -0.46
Upk2P38575 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk2P38575 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk2P38575 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk2P38575 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk2P38575 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upk2P38575 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Upk2P38575 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Upk2P38575 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.16□□□□□ -0.46
Upk2P38575 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Upk2P38575 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.16□□□□□ -0.46
Upk2P38575 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk2P38575 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Upk2P38575 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Upk2P38575 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.16□□□□□ -0.46
Upk2P38575 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Upk2P38575 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.16□□□□□ -0.46
Upk2P38575 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.16□□□□□ -0.46
Upk2P38575 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk2P38575 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Upk2P38575 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.15□□□□□ -0.46
Upk2P38575 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Upk2P38575 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.15□□□□□ -0.46
Upk2P38575 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.15□□□□□ -0.46
Upk2P38575 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk2P38575 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk2P38575 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.15□□□□□ -0.46
Upk2P38575 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk2P38575 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Gm13223-201ENSMUST00000118609 747 ntBASIC12.15□□□□□ -0.46
Upk2P38575 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.15□□□□□ -0.46
Upk2P38575 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.15□□□□□ -0.46
Upk2P38575 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk2P38575 Gm8927-201ENSMUST00000181978 981 ntBASIC12.15□□□□□ -0.46
Upk2P38575 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upk2P38575 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upk2P38575 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.15□□□□□ -0.46
Upk2P38575 Gm5425-201ENSMUST00000214125 459 ntBASIC12.15□□□□□ -0.46
Upk2P38575 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.15□□□□□ -0.46
Upk2P38575 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Gm3222-201ENSMUST00000071282 990 ntBASIC12.15□□□□□ -0.46
Upk2P38575 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upk2P38575 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upk2P38575 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk2P38575 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk2P38575 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk2P38575 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Upk2P38575 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Upk2P38575 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.15□□□□□ -0.47
Upk2P38575 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.14□□□□□ -0.47
Upk2P38575 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms