Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.82□□□□□ -0.36
Foxa1P35582 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Foxa1P35582 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Gm13385-201ENSMUST00000121089 220 ntBASIC12.82□□□□□ -0.36
Foxa1P35582 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.82□□□□□ -0.36
Foxa1P35582 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Foxa1P35582 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.82□□□□□ -0.36
Foxa1P35582 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Gm20445-201ENSMUST00000061905 565 ntBASIC12.82□□□□□ -0.36
Foxa1P35582 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Foxa1P35582 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.82□□□□□ -0.36
Foxa1P35582 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxa1P35582 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Foxa1P35582 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.82□□□□□ -0.36
Foxa1P35582 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.82□□□□□ -0.36
Foxa1P35582 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Foxa1P35582 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.81□□□□□ -0.36
Foxa1P35582 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Foxa1P35582 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.81□□□□□ -0.36
Foxa1P35582 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Foxa1P35582 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Foxa1P35582 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.81□□□□□ -0.36
Foxa1P35582 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.81□□□□□ -0.36
Foxa1P35582 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Gm5425-201ENSMUST00000214125 459 ntBASIC12.81□□□□□ -0.36
Foxa1P35582 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.81□□□□□ -0.36
Foxa1P35582 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.81□□□□□ -0.36
Foxa1P35582 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Foxa1P35582 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Foxa1P35582 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxa1P35582 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Foxa1P35582 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.81□□□□□ -0.36
Foxa1P35582 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Foxa1P35582 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.8□□□□□ -0.36
Foxa1P35582 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Foxa1P35582 Mir698-201ENSMUST00000102164 109 ntBASIC12.8□□□□□ -0.36
Foxa1P35582 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.8□□□□□ -0.36
Foxa1P35582 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.8□□□□□ -0.36
Foxa1P35582 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Foxa1P35582 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Foxa1P35582 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Foxa1P35582 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Foxa1P35582 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms