Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.2□□□□□ -0.14
Mmp13P33435 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Mmp13P33435 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Mmp13P33435 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Mmp13P33435 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.2□□□□□ -0.14
Mmp13P33435 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Mmp13P33435 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Mmp13P33435 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.19□□□□□ -0.14
Mmp13P33435 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Mmp13P33435 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.19□□□□□ -0.14
Mmp13P33435 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Mmp13P33435 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.19□□□□□ -0.14
Mmp13P33435 Gm6415-201ENSMUST00000118488 348 ntBASIC14.19□□□□□ -0.14
Mmp13P33435 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 AA543401-201ENSMUST00000164248 1269 ntBASIC14.19□□□□□ -0.14
Mmp13P33435 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.19□□□□□ -0.14
Mmp13P33435 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.19□□□□□ -0.14
Mmp13P33435 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.19□□□□□ -0.14
Mmp13P33435 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.19□□□□□ -0.14
Mmp13P33435 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Mmp13P33435 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Mmp13P33435 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Mmp13P33435 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.19□□□□□ -0.14
Mmp13P33435 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Mmp13P33435 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Mmp13P33435 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Mmp13P33435 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp13P33435 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Mmp13P33435 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp13P33435 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.18□□□□□ -0.14
Mmp13P33435 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.18□□□□□ -0.14
Mmp13P33435 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Mmp13P33435 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.18□□□□□ -0.14
Mmp13P33435 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp13P33435 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.18□□□□□ -0.14
Mmp13P33435 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Mmp13P33435 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.18□□□□□ -0.14
Mmp13P33435 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp13P33435 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp13P33435 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.18□□□□□ -0.14
Mmp13P33435 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Mmp13P33435 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Mmp13P33435 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Mmp13P33435 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms