Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.24□□□□□ -0.13
Nfkb1P25799 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nfkb1P25799 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nfkb1P25799 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nfkb1P25799 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.23□□□□□ -0.13
Nfkb1P25799 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nfkb1P25799 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Nfkb1P25799 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Gm24420-201ENSMUST00000176676 59 ntBASIC14.23□□□□□ -0.13
Nfkb1P25799 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.23□□□□□ -0.13
Nfkb1P25799 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nfkb1P25799 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.23□□□□□ -0.13
Nfkb1P25799 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nfkb1P25799 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.22□□□□□ -0.13
Nfkb1P25799 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nfkb1P25799 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.22□□□□□ -0.13
Nfkb1P25799 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nfkb1P25799 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Nfkb1P25799 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.22□□□□□ -0.13
Nfkb1P25799 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.22□□□□□ -0.13
Nfkb1P25799 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
Nfkb1P25799 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.22□□□□□ -0.13
Nfkb1P25799 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.22□□□□□ -0.13
Nfkb1P25799 Gm19078-201ENSMUST00000206311 727 ntBASIC14.22□□□□□ -0.13
Nfkb1P25799 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.22□□□□□ -0.13
Nfkb1P25799 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Nfkb1P25799 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nfkb1P25799 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nfkb1P25799 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nfkb1P25799 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nfkb1P25799 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.21□□□□□ -0.13
Nfkb1P25799 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.21□□□□□ -0.13
Nfkb1P25799 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Gm9002-201ENSMUST00000178437 499 ntBASIC14.21□□□□□ -0.13
Nfkb1P25799 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.21□□□□□ -0.13
Nfkb1P25799 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Gm29741-201ENSMUST00000192667 421 ntBASIC14.21□□□□□ -0.13
Nfkb1P25799 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms