Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.83■□□□□ 0.44
Hoxc9P09633 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.83■□□□□ 0.44
Hoxc9P09633 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.83■□□□□ 0.44
Hoxc9P09633 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Hoxc9P09633 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Hoxc9P09633 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Hoxc9P09633 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc9P09633 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.82■□□□□ 0.44
Hoxc9P09633 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Hoxc9P09633 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm14350-201ENSMUST00000116642 640 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm14723-201ENSMUST00000118686 215 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm37008-201ENSMUST00000195712 319 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm10268-201ENSMUST00000085340 555 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.82■□□□□ 0.44
Hoxc9P09633 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.82■□□□□ 0.44
Hoxc9P09633 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.82■□□□□ 0.44
Hoxc9P09633 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc9P09633 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Hoxc9P09633 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.81■□□□□ 0.44
Hoxc9P09633 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hoxc9P09633 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hoxc9P09633 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hoxc9P09633 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.81■□□□□ 0.44
Hoxc9P09633 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hoxc9P09633 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc9P09633 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.8■□□□□ 0.44
Hoxc9P09633 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hoxc9P09633 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Hoxc9P09633 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.8■□□□□ 0.44
Hoxc9P09633 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.8■□□□□ 0.44
Hoxc9P09633 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Hoxc9P09633 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hoxc9P09633 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms