Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NclP09405 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NclP09405 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NclP09405 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Gm15376-201ENSMUST00000122258 783 ntBASIC20.53■□□□□ 0.88
NclP09405 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Gm26464-201ENSMUST00000157094 305 ntBASIC20.53■□□□□ 0.88
NclP09405 Gm17150-201ENSMUST00000165577 381 ntBASIC20.53■□□□□ 0.88
NclP09405 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NclP09405 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
NclP09405 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC20.53■□□□□ 0.88
NclP09405 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC20.52■□□□□ 0.88
NclP09405 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NclP09405 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NclP09405 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NclP09405 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC20.52■□□□□ 0.88
NclP09405 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
NclP09405 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NclP09405 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NclP09405 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC20.52■□□□□ 0.88
NclP09405 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NclP09405 Gm8584-201ENSMUST00000171982 758 ntBASIC20.52■□□□□ 0.88
NclP09405 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NclP09405 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NclP09405 Gm5356-201ENSMUST00000093326 615 ntBASIC20.52■□□□□ 0.88
NclP09405 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NclP09405 Sorbs3-204ENSMUST00000227929 2460 ntBASIC20.52■□□□□ 0.88
NclP09405 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NclP09405 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
NclP09405 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NclP09405 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
NclP09405 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
NclP09405 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NclP09405 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NclP09405 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NclP09405 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NclP09405 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NclP09405 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NclP09405 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NclP09405 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NclP09405 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC20.51■□□□□ 0.87
NclP09405 Mmp14-206ENSMUST00000225641 3238 ntBASIC20.51■□□□□ 0.87
NclP09405 Gm15824-201ENSMUST00000119516 955 ntBASIC20.51■□□□□ 0.87
NclP09405 Gm13829-201ENSMUST00000119600 138 ntBASIC20.51■□□□□ 0.87
NclP09405 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NclP09405 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NclP09405 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NclP09405 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NclP09405 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NclP09405 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NclP09405 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NclP09405 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
NclP09405 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 AC168058.1-201ENSMUST00000219521 2282 ntBASIC20.5■□□□□ 0.87
NclP09405 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Gm12485-201ENSMUST00000119641 291 ntBASIC20.5■□□□□ 0.87
NclP09405 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC20.5■□□□□ 0.87
NclP09405 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC20.5■□□□□ 0.87
NclP09405 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC20.5■□□□□ 0.87
NclP09405 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC20.5■□□□□ 0.87
NclP09405 AC125117.1-201ENSMUST00000228121 468 ntBASIC20.5■□□□□ 0.87
NclP09405 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Gm13859-201ENSMUST00000119936 1423 ntBASIC20.5■□□□□ 0.87
NclP09405 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC20.5■□□□□ 0.87
NclP09405 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NclP09405 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NclP09405 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NclP09405 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms