Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hoxc8P09025 Gm16372-201ENSMUST00000073088 450 ntBASIC14.63□□□□□ -0.07
Hoxc8P09025 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hoxc8P09025 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.63□□□□□ -0.07
Hoxc8P09025 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hoxc8P09025 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.63□□□□□ -0.07
Hoxc8P09025 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hoxc8P09025 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.63□□□□□ -0.07
Hoxc8P09025 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Hoxc8P09025 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.63□□□□□ -0.07
Hoxc8P09025 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc8P09025 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Hoxc8P09025 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Hoxc8P09025 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.62□□□□□ -0.07
Hoxc8P09025 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Mir686-201ENSMUST00000102174 109 ntBASIC14.62□□□□□ -0.07
Hoxc8P09025 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.62□□□□□ -0.07
Hoxc8P09025 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.62□□□□□ -0.07
Hoxc8P09025 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.62□□□□□ -0.07
Hoxc8P09025 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.62□□□□□ -0.07
Hoxc8P09025 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.62□□□□□ -0.07
Hoxc8P09025 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.62□□□□□ -0.07
Hoxc8P09025 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.62□□□□□ -0.07
Hoxc8P09025 Sybu-209ENSMUST00000228639 4113 ntBASIC14.62□□□□□ -0.07
Hoxc8P09025 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.62□□□□□ -0.07
Hoxc8P09025 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.62□□□□□ -0.07
Hoxc8P09025 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Hoxc8P09025 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.62□□□□□ -0.07
Hoxc8P09025 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc8P09025 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.62□□□□□ -0.07
Hoxc8P09025 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Hoxc8P09025 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxc8P09025 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.61□□□□□ -0.07
Hoxc8P09025 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.61□□□□□ -0.07
Hoxc8P09025 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxc8P09025 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.61□□□□□ -0.07
Hoxc8P09025 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.61□□□□□ -0.07
Hoxc8P09025 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.61□□□□□ -0.07
Hoxc8P09025 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.61□□□□□ -0.07
Hoxc8P09025 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.61□□□□□ -0.07
Hoxc8P09025 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxc8P09025 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.61□□□□□ -0.07
Hoxc8P09025 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc8P09025 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Hoxc8P09025 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms