Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ifna1P01572 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.68□□□□□ -0.54
Ifna1P01572 Gm44608-201ENSMUST00000206827 855 ntBASIC11.68□□□□□ -0.54
Ifna1P01572 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.68□□□□□ -0.54
Ifna1P01572 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.68□□□□□ -0.54
Ifna1P01572 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Ifna1P01572 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.68□□□□□ -0.54
Ifna1P01572 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.68□□□□□ -0.54
Ifna1P01572 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.68□□□□□ -0.54
Ifna1P01572 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.68□□□□□ -0.54
Ifna1P01572 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ifna1P01572 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Ifna1P01572 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ifna1P01572 Gm11543-201ENSMUST00000120758 370 ntBASIC11.67□□□□□ -0.54
Ifna1P01572 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.67□□□□□ -0.54
Ifna1P01572 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.67□□□□□ -0.54
Ifna1P01572 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ifna1P01572 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ifna1P01572 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ifna1P01572 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.66□□□□□ -0.54
Ifna1P01572 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.66□□□□□ -0.54
Ifna1P01572 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Ifna1P01572 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ifna1P01572 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Gm15957-201ENSMUST00000118893 974 ntBASIC11.66□□□□□ -0.54
Ifna1P01572 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ifna1P01572 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.66□□□□□ -0.54
Ifna1P01572 Gm2445-201ENSMUST00000182798 989 ntBASIC11.66□□□□□ -0.54
Ifna1P01572 Gm17971-201ENSMUST00000190239 806 ntBASIC11.66□□□□□ -0.54
Ifna1P01572 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.66□□□□□ -0.54
Ifna1P01572 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ifna1P01572 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms