Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CopeO89079 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.29□□□□□ -0.12
CopeO89079 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.29□□□□□ -0.12
CopeO89079 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.29□□□□□ -0.12
CopeO89079 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Gm9727-201ENSMUST00000161387 555 ntBASIC14.29□□□□□ -0.12
CopeO89079 AA543401-201ENSMUST00000164248 1269 ntBASIC14.29□□□□□ -0.12
CopeO89079 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.29□□□□□ -0.12
CopeO89079 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.29□□□□□ -0.12
CopeO89079 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CopeO89079 Gm20553-201ENSMUST00000204205 844 ntBASIC14.29□□□□□ -0.12
CopeO89079 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.29□□□□□ -0.12
CopeO89079 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CopeO89079 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CopeO89079 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CopeO89079 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CopeO89079 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CopeO89079 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.29□□□□□ -0.12
CopeO89079 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
CopeO89079 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CopeO89079 Gm11025-201ENSMUST00000140773 466 ntBASIC14.28□□□□□ -0.12
CopeO89079 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.28□□□□□ -0.12
CopeO89079 Mir8117-201ENSMUST00000184773 107 ntBASIC14.28□□□□□ -0.12
CopeO89079 AA619741-201ENSMUST00000195095 646 ntBASIC14.28□□□□□ -0.12
CopeO89079 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CopeO89079 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.28□□□□□ -0.12
CopeO89079 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CopeO89079 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.28□□□□□ -0.12
CopeO89079 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.28□□□□□ -0.12
CopeO89079 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CopeO89079 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CopeO89079 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopeO89079 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CopeO89079 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CopeO89079 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.27□□□□□ -0.12
CopeO89079 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CopeO89079 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CopeO89079 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CopeO89079 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CopeO89079 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CopeO89079 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CopeO89079 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CopeO89079 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CopeO89079 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CopeO89079 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CopeO89079 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.27□□□□□ -0.12
CopeO89079 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CopeO89079 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.27□□□□□ -0.12
CopeO89079 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopeO89079 Gm2810-201ENSMUST00000118681 990 ntBASIC14.27□□□□□ -0.13
CopeO89079 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopeO89079 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.27□□□□□ -0.13
CopeO89079 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.27□□□□□ -0.13
CopeO89079 Gm17271-201ENSMUST00000165535 355 ntBASIC14.27□□□□□ -0.13
CopeO89079 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.27□□□□□ -0.13
CopeO89079 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CopeO89079 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CopeO89079 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CopeO89079 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopeO89079 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopeO89079 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.27□□□□□ -0.13
CopeO89079 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopeO89079 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CopeO89079 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.27□□□□□ -0.13
CopeO89079 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopeO89079 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CopeO89079 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms