Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vti1bO88384 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vti1bO88384 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Vti1bO88384 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Vti1bO88384 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Vti1bO88384 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.23□□□□□ -0.29
Vti1bO88384 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.23□□□□□ -0.29
Vti1bO88384 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Vti1bO88384 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vti1bO88384 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vti1bO88384 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Vti1bO88384 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.23□□□□□ -0.29
Vti1bO88384 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Vti1bO88384 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.23□□□□□ -0.29
Vti1bO88384 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.23□□□□□ -0.29
Vti1bO88384 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.23□□□□□ -0.29
Vti1bO88384 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vti1bO88384 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.23□□□□□ -0.29
Vti1bO88384 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.23□□□□□ -0.29
Vti1bO88384 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1bO88384 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.22□□□□□ -0.29
Vti1bO88384 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.22□□□□□ -0.29
Vti1bO88384 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.22□□□□□ -0.29
Vti1bO88384 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.22□□□□□ -0.29
Vti1bO88384 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Vti1bO88384 Gm8584-201ENSMUST00000171982 758 ntBASIC13.22□□□□□ -0.29
Vti1bO88384 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.22□□□□□ -0.29
Vti1bO88384 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.22□□□□□ -0.29
Vti1bO88384 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.22□□□□□ -0.29
Vti1bO88384 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.22□□□□□ -0.29
Vti1bO88384 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Vti1bO88384 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.22□□□□□ -0.29
Vti1bO88384 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vti1bO88384 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.22□□□□□ -0.29
Vti1bO88384 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1bO88384 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Vti1bO88384 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vti1bO88384 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms